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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015884366.1_cds_XP_016438804.1_34429
CDS Infomation

[gene=LOC107764714] [db_xref=GeneID:107764714] [protein=IAA-amino acid hydrolase ILR1-like 2] [protein_id=XP_016438804.1] [location=complement(join(5504..5893,6406..6534,6881..7195,7294..7419,8422..8793))] [gbkey=CDS]
Sequence

ATGGGTGCTAAGGAAGTTCTAATTTTGGTGCTTGTATGTATGTTCATTGTTTTTCCTTCG
TGTCACGGCGATGATGAGTGCTTGAATCCGTTTTTGGTAGATCAAAACTGTTACGTGAAA
GATTATATTACAAAATTAGCAAATGCTACGGAGACAGTGAAGTGGATGATGAAAATAAGG
AGACAAATTCACGAGAACCCAGAACTTGCTTATGAAGAATTTAAGACGAGTGGTTTGATC
AGAGAGGAGCTTGATCGGATGGGAGTAAAGTACCGGTGGCCGGTGGCTAAGACCGGAGTT
GTTGCCACCATCGGCTCCGGTAAGCCGCCATTTGTGGCTCTCAGAGCAGACATGGATGCT
TTGCCTATTCAGGAATTGGCGAAATGGGAGCACAAGAGCAAAGTTGATGGAAAAATGCAT
GCTTGTGCTCATGATGCCCATACTGCCATGCTTCTTGGTGCTGCCAAGATATTACAACAA
CTCCGACACAATTTACAGGGAACAGTGGTGTTAATTTTTCAACCAGCTGAAGAACGAGGG
CATGGGGCTAAAGATATGATAGAAGAAGGAGTTCTTGAAAATGTGGAAGCCATTTTTGGA
ATGCACTTAGTTCATAAGTATGAAAGTGGAGTAGTTGCATCTAGGCCTGGTGAATTCTTG
GCTGGATGTGGAAGCTTTAAAGCTACAATTAGAGGAAAAGGAGGTCATGCTGCTGTTCCA
CACGATTCTGTTGATCCAATTTTGGCTGCTTCTACTTCTGTTATTAGTTTGCAAAGTATT
GTCTCTAGAGAGACTGATCCTCTTGAATCCCAGGTAGTTTCTGTTGCCATGATTGAAGGG
GGGCATGCATTTAATATCATACCAGAATTAGCTACAATTTCCGGGACCTATAGAGCATTC
AGTAAGAAGAGTTTCTACGGTTTGAGGAAAAGAATTGAAGAGGTGATACGAGCACAAGCA
GCAGTACATCGATGTACGGTCGAGATTGACTTTGATGGTCGAGAAAATCCAACACTTCCT
CCAACAATAAACGATGAGAGAATATACGAACATGCCCGAAAAGTTTCAAAAATGATTGTT
GGGGAAGAGAGTTTCAAAATAGCACCTAGCTTCATGGGAAGTGAAGATTTTGCAGTGTTT
TTAGAGAAAGTTCCTGGTTCCTTCTTCCTTTTGGGAACAAAAAATGAAAAGATTGGTGCT
ATTTACCCTCCACACAATCCACATTTCATCATTGATGAGGATGTCCTTCCAATTGGTGCT
GCAATTCATGCTACTTTTGCATATTCTTACCTCTTAAATTCAACAAATAAGTTTACTTCT
CATTCTTCTTAA

Peptide Sequence

PEP ID

XP_016438804.1
PEP Infomation

PREDICTED: IAA-amino acid hydrolase ILR1-like 2 [Nicotiana tabacum]
Sequence

MGAKEVLILVLVCMFIVFPSCHGDDECLNPFLVDQNCYVKDYITKLANATETVKWMMKIR
RQIHENPELAYEEFKTSGLIREELDRMGVKYRWPVAKTGVVATIGSGKPPFVALRADMDA
LPIQELAKWEHKSKVDGKMHACAHDAHTAMLLGAAKILQQLRHNLQGTVVLIFQPAEERG
HGAKDMIEEGVLENVEAIFGMHLVHKYESGVVASRPGEFLAGCGSFKATIRGKGGHAAVP
HDSVDPILAASTSVISLQSIVSRETDPLESQVVSVAMIEGGHAFNIIPELATISGTYRAF
SKKSFYGLRKRIEEVIRAQAAVHRCTVEIDFDGRENPTLPPTINDERIYEHARKVSKMIV
GEESFKIAPSFMGSEDFAVFLEKVPGSFFLLGTKNEKIGAIYPPHNPHFIIDEDVLPIGA
AIHATFAYSYLLNSTNKFTSHSS

Transcript Sequence

Gene sequence data has not been registered.